PPDB

The Plant Proteome Database

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AT1G55520.1   TATA binding protein 2

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
TAIR curated location: nucleus
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55520.2 11Arabidopsis thaliana2E-1482001001000 (0)_
AT1G55520.4 11Arabidopsis thaliana2E-1482001001000 (0)_
AT3G13445.1 11Arabidopsis thaliana1E-13920093960 (0)_
Os03g45410.1 7Oryza sativa3E-13020987890 (0)_
Os10g29660.1 6Oryza sativa4E-12719488940 (0)_
Os12g39070.1 7Oryza sativa5E-12324474760 (0)_
Zm00001eb218190_P001 agpv5Zea mays2E-13820093960 (0)_
v1_GRMZM2G161418_P02 4a53Zea mays2E-13820093962 (2)_
GRMZM2G161418_P02 3.21Zea mays2E-13820093960 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3378(2) DUF4295(2) TBP(2)
TargetP: Cytoplasm (Class 1 C0.123; M0.054; S0.061; _0.954)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 200 aa (-cTP 120)
Molecular Weight 22.40 kDA(-cTP )
PI 9.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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