PPDB

PPDB	The Plant Proteome Database

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AT1G55450.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Lab Annot.

embryo-abundant protein-related
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55450.2 11 Arabidopsis thaliana 0 320 97 97 16 (11) _
AT3G54150.2 11 Arabidopsis thaliana 1E-162 258 82 91 0 (0) _
AT3G54150.1 11 Arabidopsis thaliana 1E-162 264 81 90 0 (0) _
Os01g40660.1 7 Oryza sativa 2E-80 263 44 65 0 (0) M
Os01g51870.1 7 Oryza sativa 5E-76 259 44 64 0 (0) M
Os01g20206.1 7 Oryza sativa 4E-49 264 35 51 0 (0) M
Zm00001eb160730_P001 agpv5 Zea mays 1E-77 240 48 66 0 (0) M
GRMZM2G087769_P01 3.21 Zea mays 1E-77 240 48 66 0 (0) M
v1_GRMZM2G087769_P01 4a53 Zea mays 1E-77 240 48 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DREV(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_15(1) Methyltransf_18
TargetP:	Cytoplasm (Class 3 C0.109; M0.275; S0.084; _0.688)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	311 aa (-cTP 303)
Molecular Weight	34.48 kDA(-cTP )
PI	6.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1616	Detail								Natural Senescence leaf [A. thaliana]
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17916636(root (NaCl stress))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data