PPDB

The Plant Proteome Database

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AT1G55370.1   NDH-dependent cyclic electron flow 5

Lab Annot. NDH-dependent cyclic electron flow 5 (NDF5) - PnsB2 homologue
Mapman: 1.1.6 PS.lightreaction.NADH DH
Curated Location thylakoid (Pubmed: 23198870 19122188 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55370.2 11Arabidopsis thaliana02901001006 (2)C
AT1G64770.2 11Arabidopsis thaliana2E-12250274365 (63)C
AT1G64770.1 11Arabidopsis thaliana3E-122502743161 (146)C
Os03g53710.1 7Oryza sativa3E-4227333510 (0)C
Os03g06230.1 7Oryza sativa1E-10260264336 (36)C
Zm00001eb057170_P001 agpv5Zea mays2E-4327834500 (0)C
GRMZM2G011373_P01 3.21Zea mays2E-42277345018 (14)C
Zm00001eb057170_P002 agpv5Zea mays2E-4227734500 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 3 C0.795; M0.247; S0.006; _0.020)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 308 aa (-cTP 259)
Molecular Weight 34.38 kDA(-cTP 28.91)
PI 5.86(-cTP 5.08)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)

Comparative Proteomics Data


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