PPDB

PPDB	The Plant Proteome Database

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AT1G55350.1 calpain-type cysteine protease family

Lab Annot.

Ca-dependent cysteine-type (calpain) endopeptidase DEK1 (DEFECTIVE KERNEL 1)
Mapman: 29.5.3.1.2* protein.degradation.cysteine protease.CA.C2

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55350.2 11 Arabidopsis thaliana 0 2151 100 100 0 (0) _
AT1G55350.3 11 Arabidopsis thaliana 0 2151 100 100 0 (0) _
AT1G55350.4 11 Arabidopsis thaliana 0 2151 100 100 0 (0) _
Os02g47970.1 7 Oryza sativa 0 2164 71 83 0 (0) S
Zm00001eb014030_P002 agpv5 Zea mays 0 2164 70 83 0 (0) S
GRMZM2G321753_P01 3.21 Zea mays 0 2164 70 83 0 (0) S
Zm00001eb014030_P001 agpv5 Zea mays 0 2164 70 82 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Calpain_III(1) Laminin_G_2(1) Laminin_G_3(1) Peptidase_C2(1)
TargetP:	Cytoplasm (Class 4 C0.004; M0.044; S0.309; _0.563)
Predotar:
Subcel. Location:
TM-HMM prediction:	23 TMs
Aramemnon:	23 TMs
TAT position:
Length	2151 aa (-cTP 2090)
Molecular Weight	238.26 kDA(-cTP )
PI	6.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data