PPDB

The Plant Proteome Database

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AT1G55350.1   calpain-type cysteine protease family

Lab Annot. Ca-dependent cysteine-type (calpain) endopeptidase DEK1 (DEFECTIVE KERNEL 1)
Mapman: 29.5.3.1.2* protein.degradation.cysteine protease.CA.C2
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55350.2 11Arabidopsis thaliana021511001000 (0)_
AT1G55350.3 11Arabidopsis thaliana021511001000 (0)_
AT1G55350.4 11Arabidopsis thaliana021511001000 (0)_
Os02g47970.1 7Oryza sativa0216471830 (0)S
Zm00001eb014030_P002 agpv5Zea mays0216470830 (0)S
GRMZM2G321753_P01 3.21Zea mays0216470830 (0)S
Zm00001eb014030_P001 agpv5Zea mays0216470820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Calpain_III(1) Laminin_G_2(1) Laminin_G_3(1) Peptidase_C2(1)
TargetP: Cytoplasm (Class 4 C0.004; M0.044; S0.309; _0.563)
Predotar:
Subcel. Location:
TM-HMM prediction: 23 TMs
Aramemnon: 23 TMs
TAT position:
Length 2151 aa (-cTP 2090)
Molecular Weight 238.26 kDA(-cTP )
PI 6.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help