PPDB

PPDB	The Plant Proteome Database

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AT1G55325.1 RNA polymerase II transcription mediator

Lab Annot.

unknown protein TRAP_240kDa domain
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55325.4 11 Arabidopsis thaliana 0 1970 94 94 0 (0) _
AT1G55325.3 11 Arabidopsis thaliana 0 1970 94 94 0 (0) _
AT1G55325.2 11 Arabidopsis thaliana 0 1970 93 94 0 (0) _
Os05g37500.1 7 Oryza sativa 0 2008 43 58 0 (0) _
Zm00001eb379470_P002 agpv5 Zea mays 0 2019 44 59 0 (0) _
Zm00001eb379470_P001 agpv5 Zea mays 0 2016 44 58 0 (0) _
v1_GRMZM2G153792_P02 4a53 Zea mays 0 1476 46 61 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Med13_C(2) Med13_N(1) MID_MedPIWI(2)
TargetP:	Cytoplasm (Class 5 C0.027; M0.421; S0.055; _0.499)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1921 aa (-cTP 1886)
Molecular Weight	208.46 kDA(-cTP )
PI	5.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

17272265(ubiquinated proteins (suspension cells))

Comparative Proteomics Data