PPDB

The Plant Proteome Database

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AT1G55310.3   SC35-like splicing factor 33

Lab Annot. SC35-like splicing factor 33
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55310.1 11Arabidopsis thaliana029995950 (0)C
AT1G55310.5 11Arabidopsis thaliana2E-14422894940 (0)C
AT1G55310.2 11Arabidopsis thaliana2E-14422894940 (0)C
Os03g25770.1 7Oryza sativa6E-5614072800 (0)M
Os03g25770.2 7Oryza sativa8E-5614072800 (0)M
Os07g43950.1 7Oryza sativa2E-5114763740 (0)C
v1_GRMZM2G060594_P05 4a53Zea mays8E-6320861669 (9)M
Zm00001eb328450_P009 agpv5Zea mays8E-6320861660 (0)M
Zm00001eb328450_P006 agpv5Zea mays8E-6320861660 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM_2(1) RRM_1(1)
TargetP: Mitochondria (Class 5 C0.615; M0.617; S0.011; _0.105)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 299 aa (-cTP 275)
Molecular Weight 34.64 kDA(-cTP )
PI 11.66(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help