PPDB

PPDB	The Plant Proteome Database

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AT1G55310.1 SC35-like splicing factor 33

Lab Annot.

SC35-like splicing factor 33
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

TAIR curated location: interchromatin granule & nuclear speck15133128,15034145

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55310.3 11 Arabidopsis thaliana 0 299 95 95 0 (0) M
AT1G55310.5 11 Arabidopsis thaliana 5E-148 216 99 100 0 (0) C
AT1G55310.2 11 Arabidopsis thaliana 5E-148 216 99 100 0 (0) C
Os03g25770.1 7 Oryza sativa 2E-59 128 79 87 0 (0) M
Os03g25770.2 7 Oryza sativa 2E-59 128 79 87 0 (0) M
Os07g43950.1 7 Oryza sativa 7E-55 135 69 81 0 (0) C
v1_GRMZM2G060594_P05 4a53 Zea mays 2E-66 196 64 70 9 (9) M
Zm00001eb328450_P009 agpv5 Zea mays 2E-66 196 64 70 0 (0) M
Zm00001eb328450_P006 agpv5 Zea mays 2E-66 196 64 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Nup35_RRM_2(1) RRM_1(1)
TargetP:	Chloroplast (Class 5 C0.646; M0.636; S0.013; _0.081)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	287 aa (-cTP 263) (-lTP 130)
Molecular Weight	33.34 kDA(-cTP 30.62)(-lTP 15.10)
PI	11.73(-cTP 11.65)(-lTP 11.432)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15496452(nucleolus)
16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data