PPDB

The Plant Proteome Database

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AT1G55260.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot. lipid binding
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55260.2 11Arabidopsis thaliana3E-16722798984 (4)_
AT2G44290.1 11Arabidopsis thaliana1E-3919135580 (0)S
AT2G44300.1 11Arabidopsis thaliana1E-3817638570 (0)S
Os03g07100.1 7Oryza sativa3E-3713946630 (0)S
Os07g09970.1 7Oryza sativa2E-2911248650 (0)S
Os03g58940.1 7Oryza sativa2E-2911644668 (8)S
Zm00001eb005130_P001 agpv5Zea mays1E-3413844610 (0)S
v1_GRMZM2G124051_P03 4a53Zea mays1E-3413844610 (0)S
GRMZM5G850455_P02 3.21Zea mays1E-3413844610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LTP_2(1) Tryp_alpha_amyl(1)
TargetP: Cytoplasm (Class 4 C0.143; M0.284; S0.039; _0.636)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 227 aa (-cTP 223)
Molecular Weight 25.31 kDA(-cTP )
PI 6.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help