PPDB

The Plant Proteome Database

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AT1G55230.1   proteinase inhibitor I4%2C serpin (DUF716)

Lab Annot. Family of unknown function (DUF716)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55240.1 11Arabidopsis thaliana3E-15329968820 (0)S
AT5G19870.1 11Arabidopsis thaliana2E-11827862770 (0)S
AT1G49470.1 11Arabidopsis thaliana1E-5427339540 (0)S
Os09g27260.1 7Oryza sativa2E-11230354730 (0)M
Os08g36030.1 7Oryza sativa1E-10527954710 (0)M
Os09g27250.1 7Oryza sativa3E-8525743670 (0)_
v1_GRMZM2G429617_P01 4a53Zea mays1E-11028756750 (0)M
GRMZM2G429617_P01 3.21Zea mays1E-11028756750 (0)M
Zm00001eb314330_P001 agpv5Zea mays1E-11028756750 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF716(1)
TargetP: Secreted (Class 1 C0.012; M0.074; S0.886; _0.021)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 300 aa (-cTP 243)
Molecular Weight 33.76 kDA(-cTP )
PI 6.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1694Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1696Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1709Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1713Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help