PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G55170.1 DNA double-strand break repair protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G14750.1 11 Arabidopsis thaliana 2E-34 199 36 63 0 (0) C
AT1G67170.1 11 Arabidopsis thaliana 1E-28 233 33 54 0 (0) _
AT1G67170.2 11 Arabidopsis thaliana 1E-28 233 33 54 0 (0) _
Os12g09089.2 7 Oryza sativa 1E-57 223 44 69 0 (0) _
Os12g09089.1 7 Oryza sativa 1E-57 223 44 69 0 (0) _
Os08g33330.1 7 Oryza sativa 9E-38 230 37 59 0 (0) M
v1_GRMZM2G152688_P01 4a53 Zea mays 4E-45 231 38 61 6 (6) M
v1_GRMZM2G152688_P03 4a53 Zea mays 4E-45 231 38 61 6 (6) M
GRMZM2G152688_P03 3.21 Zea mays 4E-45 231 38 61 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_13(1) ADIP(2) ATG16(2) CALCOCO1(2) CENP-F_leu_zip(3) DHR10(3) DivIC(4) DUF16
TargetP:	Cytoplasm (Class 5 C0.166; M0.405; S0.010; _0.530)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	283 aa (-cTP 271)
Molecular Weight	33.10 kDA(-cTP )
PI	6.54(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data