PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G55150.1 DEA(D/H)-box RNA helicase family protein

Lab Annot.

DEAD box RNA helicase (RH20)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G55150.2 11 Arabidopsis thaliana 0 483 100 100 0 (0) _
AT5G63120.2 11 Arabidopsis thaliana 0 443 70 86 1 (1) M
AT5G63120.1 11 Arabidopsis thaliana 0 372 70 87 1 (1) M
Os01g10050.1 7 Oryza sativa 0 505 80 88 4 (4) M
Os01g10050.2 7 Oryza sativa 0 505 80 88 2 (2) M
Os01g68320.2 7 Oryza sativa 0 446 72 86 2 (2) C
GRMZM2G362850_P01 3.21 Zea mays 0 432 73 88 5 (4) _
Zm00001eb143850_P004 agpv5 Zea mays 0 432 73 88 0 (0) _
Zm00001eb143850_P001 agpv5 Zea mays 0 446 64 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) Helicase_C(3) ResIII(1)
TargetP:	Cytoplasm (Class 5 C0.087; M0.475; S0.032; _0.551)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	501 aa (-cTP 469)
Molecular Weight	55.58 kDA(-cTP )
PI	9.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
17660356(tonoplast (Brassica oleracea buds))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data