PPDB

The Plant Proteome Database

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AT1G55150.1   DEA(D/H)-box RNA helicase family protein

Lab Annot. DEAD box RNA helicase (RH20)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55150.2 11Arabidopsis thaliana04831001000 (0)_
AT5G63120.2 11Arabidopsis thaliana044370862 (1)M
AT5G63120.1 11Arabidopsis thaliana037270871 (1)M
Os01g10050.1 7Oryza sativa050580884 (4)M
Os01g10050.2 7Oryza sativa050580882 (2)M
Os01g68320.2 7Oryza sativa044672862 (2)C
GRMZM2G362850_P01 3.21Zea mays0432738855 (4)_
Zm00001eb143850_P004 agpv5Zea mays043273880 (0)_
Zm00001eb143850_P001 agpv5Zea mays044664770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEAD(1) Helicase_C(3) ResIII(1)
TargetP: Cytoplasm (Class 5 C0.087; M0.475; S0.032; _0.551)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 501 aa (-cTP 469)
Molecular Weight 55.58 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)
17660356(tonoplast (Brassica oleracea buds))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help