PPDB

The Plant Proteome Database

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AT1G55080.1   mediator of RNA polymerase II transcription subunit-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55080.2 11Arabidopsis thaliana1E-13520899990 (0)_
AT1G29580.1 11Arabidopsis thaliana9E-2010051590 (0)M
Os01g31629.2 7Oryza sativa2E-3713351680 (0)_
Os01g31629.3 7Oryza sativa2E-3713351680 (0)_
Os01g31629.1 7Oryza sativa2E-3713351680 (0)_
v1_GRMZM2G160527_P01 4a53Zea mays3E-3914253690 (0)_
Zm00001eb066180_P001 agpv5Zea mays3E-3914253690 (0)_
GRMZM2G160527_P01 3.21Zea mays3E-3914253690 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ABC2_membrane_2(1) IER(1) PAT1(1)
TargetP: Cytoplasm (Class 2 C0.090; M0.207; S0.060; _0.892)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 244 aa (-cTP 226)
Molecular Weight 28.59 kDA(-cTP )
PI 5.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help