PPDB

The Plant Proteome Database

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AT1G54920.2   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54920.3 11Arabidopsis thaliana090198980 (0)_
AT1G54920.1 11Arabidopsis thaliana07431001000 (0)_
AT1G54920.4 11Arabidopsis thaliana067399990 (0)_
Os11g05100.1 7Oryza sativa2E-4531733540 (0)_
Zm00001eb164010_P002 agpv5Zea mays3E-3931733540 (0)_
GRMZM2G025126_P01 3.21Zea mays4E-2718735580 (0)_
v1_GRMZM2G025126_P01 4a53Zea mays4E-2718735580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Elongin_A(4)
TargetP: Cytoplasm (Class 2 C0.128; M0.085; S0.078; _0.887)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 890 aa (-cTP 838)
Molecular Weight 98.18 kDA(-cTP )
PI 4.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
20843791(DRM-enriched plasmamembrane)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help