PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G54890.1   Late embryogenesis abundant (LEA) protein-like protein

Lab Annot.
Mapman: 33.2 development.late embryogenesis abundant
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54370.1 11Arabidopsis thaliana8E-13733557700 (0)S
AT4G27400.1 11Arabidopsis thaliana2E-12433652670 (0)S
AT5G60530.1 11Arabidopsis thaliana4E-9130046630 (0)S
Os05g01680.1 7Oryza sativa5E-6328538550 (0)C
Os11g05360.1 7Oryza sativa7E-6127737540 (0)S
Os05g47940.1 7Oryza sativa1E-6030237540 (0)S
v1_GRMZM2G146502_P01 4a53Zea mays1E-6630937540 (0)S
Zm00001eb196940_P001 agpv5Zea mays1E-6630937540 (0)S
GRMZM2G146502_P01 3.21Zea mays1E-6630937540 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Root_cap(1)
TargetP: Secreted (Class 1 C0.002; M0.077; S0.913; _0.049)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 347 aa (-cTP 262)
Molecular Weight 38.39 kDA(-cTP )
PI 8.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help