PPDB

The Plant Proteome Database

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AT1G54860.1   Glycoprotein membrane precursor GPI-anchored

Lab Annot. Glycoprotein membrane precursor GPI-anchored
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G06035.1 11Arabidopsis thaliana9E-4716246678 (8)S
AT5G19250.1 11Arabidopsis thaliana2E-46145496943 (43)S
AT5G19240.1 11Arabidopsis thaliana6E-35179406123 (15)S
Os07g45060.1 7Oryza sativa8E-41189366312 (12)S
Zm00001eb110400_P001 agpv5Zea mays1E-3715538640 (0)S
GRMZM2G322618_P01 3.21Zea mays1E-3715538640 (0)S
v1_GRMZM2G322618_P01 4a53Zea mays1E-3715538640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CAP(1) UPF0004(1)
TargetP: Secreted (Class 1 C0.007; M0.034; S0.983; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 200 aa (-cTP 173)
Molecular Weight 21.57 kDA(-cTP )
PI 6.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2247Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help