PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G54680.1   translation initiation factor 3 subunit I

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54680.4 11Arabidopsis thaliana028997970 (0)C
AT1G54680.2 11Arabidopsis thaliana027897970 (0)_
AT1G54680.3 11Arabidopsis thaliana1E-1512051001000 (0)S
Os01g28540.1 7Oryza sativa1E-5131634514 (4)M
Os01g28540.2 7Oryza sativa7E-4831633494 (4)M
Os02g07250.1 7Oryza sativa2E-1017222450 (0)C
GRMZM2G047919_P03 3.21Zea mays3E-5027036550 (0)C
GRMZM2G047919_P05 3.21Zea mays6E-4831633502 (2)C
GRMZM2G047919_P04 3.21Zea mays1E-4331632492 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_M41(3)
TargetP: Chloroplast (Class 5 C0.398; M0.180; S0.013; _0.293)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 283 aa (-cTP 273)
Molecular Weight 31.70 kDA(-cTP 30.56)
PI 7.13(-cTP 6.83)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help