PPDB

The Plant Proteome Database

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AT1G54590.1   pre-mRNA-splicing factor-like protein

Lab Annot.
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03140.1 11Arabidopsis thaliana4E-14629473821 (0)_
Os07g38420.1 7Oryza sativa1E-10531054660 (0)_
Os03g49430.1 7Oryza sativa5E-8925556700 (0)M
Os03g49430.3 7Oryza sativa7E-2413943570 (0)_
GRMZM2G053622_P01 3.21Zea mays2E-10929258710 (0)_
v1_GRMZM2G053622_P01 4a53Zea mays2E-10929258712 (2)_
Zm00001eb426820_P001 agpv5Zea mays2E-10929258710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lentivirus_VIF(1) Prp18(1)
TargetP: Cytoplasm (Class 3 C0.253; M0.057; S0.040; _0.801)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 361 aa (-cTP 275)
Molecular Weight 42.00 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help