PPDB

The Plant Proteome Database

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AT1G54540.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot. similar to harpin-induced protein-related / HIN1-related
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65690.1 11Arabidopsis thaliana7E-6125242600 (0)C
AT5G36970.1 11Arabidopsis thaliana2E-6024840586 (6)_
AT2G27080.2 11Arabidopsis thaliana2E-3018231540 (0)_
Os04g58090.1 7Oryza sativa2E-3918638580 (0)_
Os08g23460.1 7Oryza sativa5E-3516137590 (0)_
Os09g09460.1 7Oryza sativa6E-3315438610 (0)_
Zm00001eb221020_P001 agpv5Zea mays6E-4016243590 (0)_
v1_GRMZM2G105987_P01 4a53Zea mays6E-4016243590 (0)_
GRMZM2G105987_P01 3.21Zea mays6E-4016243590 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1)
TargetP: Cytoplasm (Class 3 C0.216; M0.066; S0.009; _0.784)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 239 aa (-cTP 169)
Molecular Weight 26.38 kDA(-cTP )
PI 9.83(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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