PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G54450.1 Calcium-binding EF-hand family protein

Lab Annot.

Calcium-binding EF-hand protein
Mapman: 29.4 protein.postranslational modification

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G28850.2 11 Arabidopsis thaliana 0 531 76 85 16 (6) _
AT5G28900.1 11 Arabidopsis thaliana 0 531 76 85 16 (6) _
AT5G44090.1 11 Arabidopsis thaliana 0 530 68 80 18 (15) _
Os10g33680.1 7 Oryza sativa 0 536 72 84 21 (21) _
Os02g09840.1 7 Oryza sativa 0 540 63 76 0 (0) _
Os05g05710.1 7 Oryza sativa 9E-21 320 25 46 0 (0) _
Zm00001eb045890_P004 agpv5 Zea mays 0 536 69 82 0 (0) _
Zm00001eb045890_P003 agpv5 Zea mays 0 536 69 82 0 (0) _
GRMZM2G148323_P01 3.21 Zea mays 0 536 69 82 55 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4187(1) EF-hand_1(4) EF-hand_13(1) EF-hand_5(3) EF-hand_6(4) EF-hand_7(4) EF-
TargetP:	Cytoplasm (Class 1 C0.065; M0.053; S0.005; _0.932)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	535 aa (-cTP 458)
Molecular Weight	61.94 kDA(-cTP )
PI	4.89(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data