PPDB

The Plant Proteome Database

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AT1G54440.1   Polynucleotidyl transferase%2C ribonuclease H fold protein with HRDC domain-containing protein

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54440.2 11Arabidopsis thaliana063999990 (0)_
AT1G54440.5 11Arabidopsis thaliana063790900 (0)_
AT1G54440.3 11Arabidopsis thaliana063789900 (0)_
Os10g30100.1 7Oryza sativa3E-17941060770 (0)C
Os03g06190.1 7Oryza sativa8E-17242857730 (0)_
Os07g32890.1 7Oryza sativa4E-5935936510 (0)M
GRMZM2G118917_P01 3.21Zea mays4E-17352150670 (0)C
v1_GRMZM2G118917_P01 4a53Zea mays4E-17352150674 (4)C
Zm00001eb047500_P002 agpv5Zea mays4E-17352150670 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DNA_pol_A_exo1(1) HRDC(1)
TargetP: Cytoplasm (Class 1 C0.076; M0.084; S0.047; _0.958)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 637 aa (-cTP 609)
Molecular Weight 73.48 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help