PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G54360.1 TBP-ASSOCIATED FACTOR 6B

Lab Annot.

TBP-associated factor TAF6.
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G54360.2 11 Arabidopsis thaliana 0 527 95 95 0 (0) _
AT1G54360.3 11 Arabidopsis thaliana 0 504 98 98 0 (0) _
AT1G54360.5 11 Arabidopsis thaliana 0 504 94 94 0 (0) _
Os01g32750.1 7 Oryza sativa 0 544 52 69 5 (5) _
GRMZM2G013908_P01 3.21 Zea mays 0 543 50 68 6 (0) _
Zm00001eb398430_P001 agpv5 Zea mays 0 543 50 68 0 (0) _
v1_GRMZM2G013908_P01 4a53 Zea mays 0 543 50 68 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBFD_NFYB_HMF(1) Histone(1) TAF(1) TAF6_C(1) TFIID-31kDa(1)
TargetP:	Cytoplasm (Class 4 C0.217; M0.038; S0.166; _0.514)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	504 aa (-cTP 423)
Molecular Weight	56.43 kDA(-cTP )
PI	8.83(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data