PPDB

 The Plant Proteome Database

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AT1G54320.1   LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G12740.1 11Arabidopsis thaliana032887910 (0)C
AT1G16360.2 11Arabidopsis thaliana034873830 (0)C
AT1G79450.1 11Arabidopsis thaliana034874840 (0)C
Os06g45430.1 7Oryza sativa2E-17833270810 (0)_
Os02g07750.1 7Oryza sativa4E-17332969820 (0)C
Os03g02830.1 7Oryza sativa7E-15633362780 (0)_
GRMZM2G058900_P02 3.21Zea mays035168800 (0)_
Zm00001eb274400_P001 agpv5Zea mays035168800 (0)_
v1_GRMZM2G058900_P02 4a53Zea mays035168800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CDC50(1) DUF1284(1)
TargetP: Chloroplast (Class 2 C0.861; M0.031; S0.041; _0.260)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 349 aa (-cTP 327) (-lTP 258)
Molecular Weight 38.95 kDA(-cTP 37.04)(-lTP 29.38)
PI 9.57(-cTP 9.57)(-lTP 9.696)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help