PPDB

The Plant Proteome Database

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AT1G54250.1   RNA polymerase Rpb8

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G59600.1 11Arabidopsis thaliana1E-101146959913 (8)_
Os06g48230.1 7Oryza sativa8E-68142668213 (13)C
Os03g62870.2 7Oryza sativa7E-6614564790 (0)_
Os03g62870.1 7Oryza sativa7E-6614564790 (0)_
v1_GRMZM2G034326_P02 4a53Zea mays2E-66142658029 (29)_
v1_GRMZM2G034326_P01 4a53Zea mays2E-66142658029 (29)_
Zm00001eb210850_P004 agpv5Zea mays2E-6614265800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rpb8(1)
TargetP: Cytoplasm (Class 4 C0.196; M0.062; S0.301; _0.676)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 146 aa (-cTP 117)
Molecular Weight 16.51 kDA(-cTP )
PI 5.92(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help