PPDB

PPDB	The Plant Proteome Database

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AT1G54230.1 Winged helix-turn-helix transcription repressor DNA-binding protein

Lab Annot.

Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G54240.1 11 Arabidopsis thaliana 3E-28 177 39 56 0 (0) _
AT1G54260.1 11 Arabidopsis thaliana 4E-11 220 30 50 0 (0) _
AT1G72740.2 11 Arabidopsis thaliana 8E-07 83 36 51 0 (0) _
GRMZM2G023667_P01 3.21 Zea mays 3E-08 172 30 45 0 (0) _
Zm00001eb361200_P001 agpv5 Zea mays 3E-08 172 30 45 0 (0) _
v1_GRMZM2G023667_P01 4a53 Zea mays 3E-08 172 30 45 0 (0) _

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3630(2) HAP1_N(2) Linker_histone(1) MCCD1(2) PLU-1(2) SEO_N(2) TipAS(2) VGPC1
TargetP:	Cytoplasm (Class 2 C0.033; M0.076; S0.219; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	232 aa (-cTP 212)
Molecular Weight	26.36 kDA(-cTP )
PI	4.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data