PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G54220.1 Dihydrolipoamide acetyltransferase%2C long form protein

Lab Annot.

Dihydrolipoamide Acetyltransferase, pyruvate DH complex
Mapman: 11.1 lipid metabolism.FA synthesis and FA elongation

Curated Location

TAIR curated location: mitochondrion14671022,14764908

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G54220.2 11 Arabidopsis thaliana 0 539 100 100 52 (12) M
AT3G13930.1 11 Arabidopsis thaliana 0 538 80 87 273 (156) M
AT3G52200.1 11 Arabidopsis thaliana 6E-101 456 41 58 106 (53) M
Os06g01630.5 7 Oryza sativa 0 553 62 76 16 (16) M
Os06g01630.1 7 Oryza sativa 0 553 62 76 16 (16) M
Os06g01630.3 7 Oryza sativa 0 451 71 85 16 (16) M
Zm00001eb240130_P001 agpv5 Zea mays 0 548 62 77 0 (0) M
v1_GRMZM2G015132_P01 4a53 Zea mays 0 548 62 77 60 (59) M
GRMZM2G015132_P01 3.21 Zea mays 0 548 62 77 81 (60) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-oxoacid_dh(1) Biotin_lipoyl(1) Biotin_lipoyl_2(1) E3_binding(1) TRAM(3)
TargetP:	Mitochondria (Class 5 C0.171; M0.337; S0.004; _0.222)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	539 aa (-cTP 517)
Molecular Weight	58.47 kDA(-cTP )
PI	7.95(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
120	Detail								root [B. rapa]	plastid stroma
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1535	Detail								leaf [A. thaliana]		wild-type
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2287	Detail								[A. thaliana]		Clp C1 WT
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2398	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/35SRecA-GFP

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
14764908(mitochondria-suspension cells)
18385124(mitochondria - leaf and suspension cell)
18385124(mitochondria)
20601493(mitochondria (diurnal change))
19888209(leaves)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data