PPDB

PPDB	The Plant Proteome Database

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AT1G54217.1 Ribosomal protein L18ae family

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G54217.7 11 Arabidopsis thaliana 1E-70 102 100 100 0 (0) _
AT1G54217.6 11 Arabidopsis thaliana 1E-70 102 100 100 0 (0) _
AT1G54217.4 11 Arabidopsis thaliana 1E-70 102 100 100 0 (0) _
Os05g08854.1 7 Oryza sativa 2E-27 88 53 69 0 (0) _
Os01g08814.2 7 Oryza sativa 7E-22 66 59 69 0 (0) _
Os01g08814.1 7 Oryza sativa 7E-22 66 59 69 0 (0) _
GRMZM2G174570_P01 3.21 Zea mays 9E-29 86 56 70 0 (0) _
GRMZM2G174570_P02 3.21 Zea mays 9E-29 86 56 70 0 (0) _
Zm00001eb337650_P002 agpv5 Zea mays 9E-29 86 56 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ABC2_membrane_3(1) Arteri_Gl(1) DUF1772(1) DUF2142(1) DUF3488(1) Ndc1_Nup(1) PEN
TargetP:	Cytoplasm (Class 1 C0.047; M0.069; S0.065; _0.979)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	102 aa (-cTP 25)
Molecular Weight	11.57 kDA(-cTP )
PI	6.55(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data