PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G54160.1   nuclear factor Y%2C subunit A5

Lab Annot.
Mapman: 27.3.14 RNA.regulation of transcription.CCAAT box binding factor family, HAP2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G14020.1 11Arabidopsis thaliana1E-8632254620 (0)C
AT3G14020.2 11Arabidopsis thaliana1E-8632254620 (0)C
AT1G72830.1 11Arabidopsis thaliana4E-4431938520 (0)_
Os07g41720.2 7Oryza sativa8E-3719546600 (0)_
Os07g41720.1 7Oryza sativa8E-3719546600 (0)_
Os03g07880.1 7Oryza sativa1E-3611162760 (0)_
Zm00001eb005690_P005 agpv5Zea mays5E-4421146620 (0)_
GRMZM2G000686_P01 3.21Zea mays5E-4421146620 (0)_
GRMZM2G000686_P02 3.21Zea mays5E-4421146620 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFB_NFYA(1)
TargetP: Cytoplasm (Class 4 C0.329; M0.227; S0.040; _0.567)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 308 aa (-cTP 265)
Molecular Weight 33.77 kDA(-cTP )
PI 9.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help