PPDB

PPDB	The Plant Proteome Database

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AT1G54150.1 E3 Ubiquitin ligase family protein

Lab Annot.

SPL2 (E3 Ubiquitin ligase)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

envelope-outer (Pubmed: 23118188 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G54150.2 11 Arabidopsis thaliana 0 295 99 99 0 (0) S
AT1G59560.1 11 Arabidopsis thaliana 6E-11 229 23 47 0 (0) M
AT1G63900.1 11 Arabidopsis thaliana 5E-10 193 25 45 0 (0) S
Os03g08000.1 7 Oryza sativa 4E-77 369 39 59 0 (0) S
Os07g45350.5 7 Oryza sativa 6E-10 187 24 44 0 (0) _
Os07g45350.4 7 Oryza sativa 7E-10 187 24 44 0 (0) _
GRMZM2G004023_P06 3.21 Zea mays 1E-87 391 38 57 0 (0) _
GRMZM2G004023_P05 3.21 Zea mays 1E-87 391 38 57 0 (0) _
v1_GRMZM2G004023_P01 4a53 Zea mays 1E-87 391 38 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FAM176(2) GIDE(1) Prok-RING_4(1) TNFR_16_TM(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC
TargetP:	Secreted (Class 2 C0.038; M0.033; S0.837; _0.136)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	383 aa (-cTP 318)
Molecular Weight	42.70 kDA(-cTP )
PI	8.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data