PPDB

PPDB	The Plant Proteome Database

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AT1G54060.1 6B-interacting protein 1-like 1

Lab Annot.

6B-interacting protein 1-like 1
Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G14180.1 11 Arabidopsis thaliana 8E-48 199 52 62 0 (0) _
AT3G58630.2 11 Arabidopsis thaliana 1E-24 107 46 65 0 (0) _
AT3G58630.1 11 Arabidopsis thaliana 1E-24 107 46 65 0 (0) _
Os02g35690.2 7 Oryza sativa 2E-25 292 34 52 0 (0) C
Os02g35690.1 7 Oryza sativa 2E-25 268 34 54 0 (0) C
Os01g48320.1 7 Oryza sativa 8E-25 100 48 69 0 (0) _
Zm00001eb157080_P002 agpv5 Zea mays 1E-37 296 33 50 0 (0) _
Zm00001eb157080_P003 agpv5 Zea mays 1E-37 296 33 50 0 (0) _
Zm00001eb157080_P001 agpv5 Zea mays 1E-37 296 33 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF573(2) MADF_DNA_bdg(3) Myb_DNA-bind_3(3) Myb_DNA-bind_4(1)
TargetP:	Chloroplast (Class 5 C0.680; M0.023; S0.015; _0.668)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	383 aa (-cTP 317)
Molecular Weight	41.73 kDA(-cTP 34.98)
PI	8.73(-cTP 9.29)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
19376835(leaf phosphoproteins)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data