PPDB

The Plant Proteome Database

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AT1G54050.1   HSP20-like chaperones superfamily protein

Lab Annot. small heat shock protein sHSP 17.4 - Class III
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54050.2 11Arabidopsis thaliana1E-1091551001000 (0)C
AT5G12030.1 11Arabidopsis thaliana2E-2211439643 (2)_
AT5G12020.1 11Arabidopsis thaliana2E-209641708 (0)_
Os02g54140.1 7Oryza sativa3E-3412352694 (4)_
Os01g08860.1 7Oryza sativa2E-1895456823 (23)_
Os03g16040.1 7Oryza sativa3E-1411034610 (0)_
Zm00001eb257130_P001 agpv5Zea mays7E-4211759780 (0)_
v1_GRMZM2G098167_P01 4a53Zea mays7E-42117597811 (11)_
GRMZM2G098167_P01 3.21Zea mays7E-42117597837 (37)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) HSP20(1)
TargetP: Chloroplast (Class 5 C0.480; M0.041; S0.319; _0.306)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 155 aa (-cTP 153)
Molecular Weight 17.36 kDA(-cTP 17.14)
PI 7.88(-cTP 8.12)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help