PPDB

The Plant Proteome Database

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AT1G54030.1   GDSL-like Lipase/Acylhydrolase superfamily protein

Lab Annot. GDSL-motif lipase, putative
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54030.2 11Arabidopsis thaliana0293991000 (0)_
AT3G14210.1 11Arabidopsis thaliana8E-9032942631390 (963)S
AT1G54010.1 11Arabidopsis thaliana5E-893444163127 (116)S
Os07g47210.1 7Oryza sativa3E-3633827480 (0)S
Os02g01980.1 7Oryza sativa2E-3331528480 (0)S
Os02g44860.1 7Oryza sativa2E-3333127480 (0)S
Zm00001eb225370_P001 agpv5Zea mays5E-3632529480 (0)M
v1_GRMZM2G042758_P01 4a53Zea mays5E-36325294814 (14)M
GRMZM2G042758_P01 3.21Zea mays5E-36325294814 (14)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1)
TargetP: Cytoplasm (Class 3 C0.331; M0.094; S0.088; _0.761)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 417 aa (-cTP 412)
Molecular Weight 46.08 kDA(-cTP )
PI 6.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help