PPDB

The Plant Proteome Database

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AT1G54020.2   GDSL-like Lipase/Acylhydrolase superfamily protein

Lab Annot. GDSL-like Lipase/Acylhydrolase protein
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54020.1 11Arabidopsis thaliana02861001000 (0)_
AT1G54020.5 11Arabidopsis thaliana02861001000 (0)_
AT1G54020.3 11Arabidopsis thaliana02861001000 (0)_
Os02g50690.1 7Oryza sativa6E-3535431470 (0)S
Os06g05630.1 7Oryza sativa5E-3432729452 (2)S
Os07g47210.1 7Oryza sativa9E-3434227470 (0)S
GRMZM2G070178_P01 3.21Zea mays3E-3434026470 (0)S
Zm00001eb330130_P001 agpv5Zea mays3E-3434026470 (0)S
v1_GRMZM2G070178_P01 4a53Zea mays3E-3434026470 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1)
TargetP: Secreted (Class 1 C0.005; M0.020; S0.990; _0.055)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 372 aa (-cTP 347)
Molecular Weight 41.80 kDA(-cTP )
PI 8.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
15539469(vacuole)
19562800(oil body mature seeds (Brassica napus))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help