PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G54020.1   GDSL-like Lipase/Acylhydrolase superfamily protein
Lab Annot. GDSL-like Lipase/Acylhydrolase protein
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54020.5 11Arabidopsis thaliana02861001000 (0)_
AT1G54020.3 11Arabidopsis thaliana02861001000 (0)_
AT1G54020.2 11Arabidopsis thaliana02861001006 (6)S
Os02g50690.2 7Oryza sativa2E-2421130480 (0)S
Os02g50690.1 7Oryza sativa6E-2421130480 (0)S
Os02g44850.1 7Oryza sativa1E-2328627460 (0)S
v1_GRMZM2G172099_P01 4a53Zea mays6E-2428326470 (0)M
GRMZM2G172099_P01 3.21Zea mays6E-2428326470 (0)M
Zm00001eb395980_P001 agpv5Zea mays6E-2428326470 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Lipase_GDSL(1)
TargetP: Cytoplasm (Class 4 C0.435; M0.150; S0.014; _0.710)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 286 aa (-cTP 219)
Molecular Weight 32.46 kDA(-cTP )
PI 7.62(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 15215502(Vacuolar proteome)
15539469(vacuole)
19562800(oil body mature seeds (Brassica napus))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help