PPDB

The Plant Proteome Database

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AT1G54000.1   GDSL-like Lipase/Acylhydrolase superfamily protein

Lab Annot. myrosinase-associated protein, putative
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G54010.1 11Arabidopsis thaliana03918791116 (116)S
AT1G54020.2 11Arabidopsis thaliana036571816 (6)S
AT3G14210.1 11Arabidopsis thaliana037370801363 (963)S
Os02g50690.1 7Oryza sativa7E-3335130450 (0)S
Os02g44860.1 7Oryza sativa8E-3133927470 (0)S
Os03g38390.1 7Oryza sativa1E-3034526490 (0)M
GRMZM2G073738_P01 3.21Zea mays4E-3537428480 (0)S
Zm00001eb260620_P001 agpv5Zea mays9E-3533929470 (0)S
GRMZM2G015708_P01 3.21Zea mays9E-3533929470 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lipase_GDSL(1) Lipase_GDSL_2(1)
TargetP: Secreted (Class 1 C0.006; M0.033; S0.993; _0.034)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 391 aa (-cTP 364)
Molecular Weight 43.19 kDA(-cTP )
PI 6.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1616Detail       Natural Senescence leaf [A. thaliana]  
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2269Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
16618929(vacuole-LOPIT-callus)
17293592(total seedlings û light and dark grown)
17151019(vacuole - suspension cell)
17526915(glycoproteome cell wall (stems))
19334764(plasma membrane (cell culture))
19478072(Boron-interacting microsomal proteins (root))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21173025(root proteome)

Comparative Proteomics Data


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