PPDB

PPDB	The Plant Proteome Database

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AT1G53950.1 ubiquitin-40S ribosomal S27a-like protein

Lab Annot.

Ubiquitin-like protein
Mapman: 29.5.11 protein.degradation.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53945.1 11 Arabidopsis thaliana 2E-34 125 51 68 0 (0) _
AT1G53930.1 11 Arabidopsis thaliana 1E-27 121 50 65 0 (0) _
AT4G05320.7 11 Arabidopsis thaliana 3E-27 158 43 53 0 (0) _
Os04g53620.4 7 Oryza sativa 1E-26 164 41 53 91 (91) _
Os02g06640.4 7 Oryza sativa 5E-26 164 41 53 91 (91) _
Os06g46770.6 7 Oryza sativa 5E-26 164 41 53 43 (43) _
v1_GRMZM2G419891_P03 4a53 Zea mays 6E-31 133 51 66 208 (205) _
v1_GRMZM2G118637_P03 4a53 Zea mays 6E-31 133 51 66 208 (205) _
GRMZM2G419891_P03 3.21 Zea mays 6E-31 133 51 66 215 (204) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Rad60-SLD(2) Rad60-SLD_2(1) ubiquitin(2) Ubiquitin_2(2) Ubiquitin_4(3)
TargetP:	Cytoplasm (Class 4 C0.076; M0.415; S0.033; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	144 aa (-cTP 111)
Molecular Weight	16.57 kDA(-cTP )
PI	7.02(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data