PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G53930.1 Ubiquitin-like superfamily protein

Lab Annot.

Ubiquitin-like protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G05320.7 11 Arabidopsis thaliana 7E-35 165 49 60 0 (0) _
AT4G05050.4 11 Arabidopsis thaliana 7E-35 165 49 60 224 (175) _
AT4G02890.1 11 Arabidopsis thaliana 5E-34 165 49 60 232 (183) _
Os04g53620.4 7 Oryza sativa 6E-34 165 49 60 91 (91) _
Os02g06640.4 7 Oryza sativa 3E-33 165 49 60 91 (91) _
Os06g46770.6 7 Oryza sativa 3E-33 165 49 60 43 (43) _
v1_GRMZM2G419891_P04 4a53 Zea mays 8E-35 165 49 60 208 (205) _
v1_GRMZM2G409726_P02 4a53 Zea mays 8E-35 165 49 60 208 (205) _
GRMZM2G419891_P04 3.21 Zea mays 8E-35 165 49 60 282 (204) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ACT_5(3) DUF2407(1) Rad60-SLD(2) TBK1_ULD(1) ubiquitin(3) Ubiquitin_2(1) Ubiquit
TargetP:	Cytoplasm (Class 3 C0.078; M0.108; S0.269; _0.852)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	158 aa (-cTP 152)
Molecular Weight	17.85 kDA(-cTP )
PI	5.34(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data