PPDB

PPDB	The Plant Proteome Database

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AT1G53600.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53600.2 11 Arabidopsis thaliana 0 717 100 100 0 (0) M
AT4G02750.1 11 Arabidopsis thaliana 1E-147 691 35 56 0 (0) M
AT1G32415.1 11 Arabidopsis thaliana 3E-139 659 38 58 0 (0) M
Os08g03676.1 7 Oryza sativa 0 631 46 66 0 (0) M
Os09g15800.1 7 Oryza sativa 2E-137 654 34 56 0 (0) M
Os12g19260.1 7 Oryza sativa 8E-135 688 34 55 0 (0) C
GRMZM5G894486_P01 3.21 Zea mays 0 636 45 65 0 (0) M
Zm00001eb417050_P002 agpv5 Zea mays 0 636 45 65 0 (0) M
Zm00001eb417050_P001 agpv5 Zea mays 0 636 45 65 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(16) PPR_1(15) PPR_2(15) PPR_3(11) PPR_long(4) RNPP_C(2) RQC(3) SRP_TPR_like(
TargetP:	Mitochondria (Class 3 C0.155; M0.613; S0.025; _0.050)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	717 aa (-cTP 628)
Molecular Weight	80.50 kDA(-cTP )
PI	8.71(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data