PPDB

The Plant Proteome Database

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AT1G53540.1   HSP20-like chaperones superfamily protein

Lab Annot. small heat shock protein sHSP 17.6C - Class CI
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46230.1 11Arabidopsis thaliana3E-9115789946 (6)_
AT5G59720.1 11Arabidopsis thaliana4E-8715984922 (2)_
AT1G07400.1 11Arabidopsis thaliana1E-7116167822 (2)_
Os03g16040.1 7Oryza sativa4E-6916567750 (0)_
Os03g15960.1 7Oryza sativa6E-6917165760 (0)_
Os03g16020.1 7Oryza sativa4E-6516070800 (0)_
Zm00001eb011930_P001 agpv5Zea mays6E-7116665780 (0)_
v1_GRMZM2G306679_P01 4a53Zea mays6E-7116665781 (1)_
GRMZM2G306679_P01 3.21Zea mays6E-7116665780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) DUF4488(1) FKBP26_C(2) HSP20(1)
TargetP: Cytoplasm (Class 3 C0.126; M0.187; S0.070; _0.753)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 157 aa (-cTP 123)
Molecular Weight 17.60 kDA(-cTP )
PI 5.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help