PPDB

PPDB	The Plant Proteome Database

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AT1G53500.1 NAD-dependent epimerase/dehydratase family protein

Lab Annot.

MUM4 (MUCILAGE-MODIFIED 4); catalytic
Mapman: 10.1.10 cell wall.precursor synthesis.RHM

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G14790.1 11 Arabidopsis thaliana 0 665 91 95 58 (20) _
AT3G14790.2 11 Arabidopsis thaliana 0 665 91 95 0 (0) _
AT1G78570.1 11 Arabidopsis thaliana 0 668 85 92 174 (77) _
Os03g17000.3 7 Oryza sativa 0 670 81 89 22 (22) _
Os03g17000.2 7 Oryza sativa 0 670 81 89 22 (22) _
Os03g17000.1 6 Oryza sativa 0 670 81 89 11 (11) _
v1_GRMZM2G166767_P01 4a53 Zea mays 0 667 82 90 25 (24) _
v1_GRMZM2G166767_P02 4a53 Zea mays 0 667 82 90 25 (24) _
Zm00001eb397570_P001 agpv5 Zea mays 0 667 82 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(2) adh_short(4) Epimerase(2) GDP_Man_Dehyd(2) NAD_binding_10(1) NAD_bi
TargetP:	Cytoplasm (Class 2 C0.020; M0.139; S0.157; _0.887)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	667 aa (-cTP 647)
Molecular Weight	75.23 kDA(-cTP )
PI	6.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1875	Detail								Total leaf [A. thaliana]	total soluble	wild-type
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2043	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2047	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2054	Detail								Total leaf [A. thaliana]	total soluble	wt and prep1-1xprep2-1xoop
2192	Detail								[A. thaliana]	total soluble	P3-trap-strepII 16
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

16242667(mature Pollen)
17407188(cotyledon)
19546170(mature pollen grains)
20118269(developing seeds)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
19508356(mature pollen grains and pollen tubes)
19292762(Ubiquitin-affinity seedling (10 d))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data