PPDB

PPDB	The Plant Proteome Database

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AT1G53490.1 RING/U-box superfamily protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53490.2 11 Arabidopsis thaliana 0 304 96 96 0 (0) _
Os02g13810.1 7 Oryza sativa 2E-151 309 67 81 0 (0) _
Os02g13810.2 7 Oryza sativa 3E-95 236 62 76 0 (0) _
Zm00001eb239370_P001 agpv5 Zea mays 4E-146 310 67 79 0 (0) _
Zm00001eb239370_P006 agpv5 Zea mays 4E-146 310 67 79 0 (0) _
Zm00001eb239370_P002 agpv5 Zea mays 5E-143 311 66 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ALMT(1) ATG16(1) BLOC1_2(2) DivIC(2) DUF1043(2) DUF1664(1) DUF2968(1) DUF3450(1)
TargetP:	Cytoplasm (Class 5 C0.045; M0.593; S0.036; _0.714)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	304 aa (-cTP 302)
Molecular Weight	34.76 kDA(-cTP )
PI	9.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data