PPDB

 The Plant Proteome Database

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AT1G53270.1   ABC-2 type transporter family protein
Lab Annot.
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G13610.1 11Arabidopsis thaliana058648650 (0)_
AT5G52860.1 11Arabidopsis thaliana1E-16160743610 (0)C
AT5G19410.1 11Arabidopsis thaliana6E-15860442620 (0)C
Os01g42900.1 7Oryza sativa059650650 (0)C
Os05g31910.1 7Oryza sativa6E-14561741590 (0)C
Os05g31910.2 7Oryza sativa5E-13755643620 (0)C
v1_GRMZM2G361066_P01 4a53Zea mays060650650 (0)M
GRMZM2G361066_P01 3.21Zea mays060650650 (0)M
Zm00001eb162070_P001 agpv5Zea mays060350650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_13(2) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA_25(1) AAA_28(1)
TargetP: Cytoplasm (Class 2 C0.115; M0.148; S0.024; _0.776)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 590 aa (-cTP 584)
Molecular Weight 66.20 kDA(-cTP )
PI 9.48(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help