PPDB

PPDB	The Plant Proteome Database

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AT1G53190.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53190.2 11 Arabidopsis thaliana 0 494 100 100 0 (0) _
AT3G15070.1 11 Arabidopsis thaliana 2E-125 534 49 58 0 (0) _
AT3G15070.2 11 Arabidopsis thaliana 2E-125 534 49 58 0 (0) _
Os01g47740.4 7 Oryza sativa 3E-35 188 40 57 0 (0) _
Os01g47740.3 7 Oryza sativa 6E-35 314 34 47 0 (0) _
Os01g47740.2 7 Oryza sativa 8E-35 149 44 62 0 (0) _
GRMZM2G120816_P04 3.21 Zea mays 3E-38 146 45 65 0 (0) _
Zm00001eb359840_P004 agpv5 Zea mays 3E-38 146 45 65 0 (0) _
v1_GRMZM2G120816_P04 4a53 Zea mays 3E-38 146 45 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_IE-1(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC
TargetP:	Cytoplasm (Class 3 C0.097; M0.246; S0.057; _0.776)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	494 aa (-cTP 450)
Molecular Weight	55.12 kDA(-cTP )
PI	6.18(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data