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AT1G53120.1
RNA-binding S4 domain-containing protein
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| Lab Annot. |
RNA-binding S4 domain-containing protein
Mapman: 27.4 RNA.RNA binding |
| Curated Location |
plastid (Pubmed: 23198870 18431481 ) (supported by in-house exprements)
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
Flot(2) S4(1) YlmH_RBD(1) |
| TargetP: |
Mitochondria (Class 4 C0.170; M0.387; S0.097; _0.009) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
320 aa (-cTP 302) |
| Molecular Weight |
34.55 kDA(-cTP ) |
| PI |
9.11(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 303 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 339 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 361 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 420 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpR1-stop (EMS) |
| 527 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt1) |
| 544 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) <600 kDa (LMA) | wild-type |
| 870 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 874 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1486 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpc1 x clps (rep. 3) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1530 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | wild-type (rep. 1) |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1946 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | wild-type |
| 1947 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 1949 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2019 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2115 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | cGep |
| 2222 | Detail | | | | | | | | Total soluble [A. thaliana] | Total soluble proteins | cGEP strep |
| 2300 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
21515685(GreenCut2)
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Comparative Proteomics Data
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