PPDB

The Plant Proteome Database

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AT1G53025.1   Ubiquitin-conjugating enzyme family protein

Lab Annot.
Mapman:
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G53025.2 11Arabidopsis thaliana05421001000 (0)_
AT3G15355.1 11Arabidopsis thaliana1E-17961949600 (0)_
AT1G53023.1 11Arabidopsis thaliana6E-15530471800 (0)_
Os09g12310.1 7Oryza sativa3E-10728154710 (0)C
Os05g48380.1 7Oryza sativa1E-10627356710 (0)_
Os01g13170.1 7Oryza sativa2E-10324860750 (0)C
Zm00001eb295480_P005 agpv5Zea mays9E-11031553670 (0)_
GRMZM2G085849_P01 3.21Zea mays1E-10931553670 (0)_
Zm00001eb295480_P003 agpv5Zea mays1E-10931553670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 5_nucleotid(1) HECW1_helix(1) UQ_con(1)
TargetP: Cytoplasm (Class 3 C0.346; M0.067; S0.104; _0.797)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 543 aa (-cTP 473)
Molecular Weight 60.55 kDA(-cTP )
PI 7.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help