PPDB

PPDB	The Plant Proteome Database

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AT1G53010.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20823.1 11 Arabidopsis thaliana 2E-14 99 35 54 0 (0) _
AT3G05200.1 11 Arabidopsis thaliana 8E-14 82 43 59 1 (1) S
AT2G17730.1 11 Arabidopsis thaliana 1E-13 83 36 59 0 (0) C
Os06g34530.1 7 Oryza sativa 9E-14 85 40 50 0 (0) _
Os09g29310.1 7 Oryza sativa 9E-14 85 38 57 0 (0) S
Os10g42390.1 7 Oryza sativa 1E-13 54 48 64 0 (0) C
Zm00001eb242580_P001 agpv5 Zea mays 3E-15 87 39 52 0 (0) S
Zm00001eb242580_P002 agpv5 Zea mays 4E-15 87 39 52 0 (0) S
Zm00001eb190560_P001 agpv5 Zea mays 5E-15 79 37 58 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Mem_trans(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1) zf
TargetP:	Secreted (Class 4 C0.002; M0.010; S0.981; _0.625)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	178 aa (-cTP 176)
Molecular Weight	19.89 kDA(-cTP )
PI	5.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data