PPDB

PPDB	The Plant Proteome Database

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AT1G53000.1 Nucleotide-diphospho-sugar transferases superfamily protein

Lab Annot.

cytidylyltransferase family
Mapman: 35.1 not assigned.no ontology

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53000.2 11 Arabidopsis thaliana 0 290 100 100 0 (0) C
Os05g48750.1 7 Oryza sativa 9E-158 253 82 89 12 (12) _
GRMZM2G119256_P02 3.21 Zea mays 4E-156 253 81 89 0 (0) C
Zm00001eb343610_P001 agpv5 Zea mays 4E-156 253 81 89 0 (0) C
v1_GRMZM2G119256_P02 4a53 Zea mays 4E-156 253 81 89 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ADH_zinc_N(1) CTP_transf_3(1) DUF2064(1) IspD(2) NTP_transf_3(1)
TargetP:	Chloroplast (Class 3 C0.610; M0.031; S0.104; _0.041)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	290 aa (-cTP 240)
Molecular Weight	32.24 kDA(-cTP 27.09)
PI	6.16(-cTP 5.10)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1611	Detail								leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1616	Detail								Natural Senescence leaf [A. thaliana]
1765	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21311031(mitochondria)
21173025(root proteome)
21988472(vacuole (unfiltered data))
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data