PPDB

PPDB	The Plant Proteome Database

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AT1G52950.1 Nucleic acid-binding%2C OB-fold-like protein

Lab Annot.

Mapman: 28.99 DNA.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G05642.1 11 Arabidopsis thaliana 1E-31 430 24 45 0 (0) _
AT4G19130.2 11 Arabidopsis thaliana 2E-17 429 22 42 0 (0) _
AT4G19130.1 11 Arabidopsis thaliana 2E-17 429 22 42 0 (0) _
Os03g11540.1 7 Oryza sativa 7E-19 395 24 43 0 (0) _
Os07g09300.1 6 Oryza sativa 1E-18 475 24 41 0 (0) _
Os05g02040.1 7 Oryza sativa 3E-17 437 24 41 0 (0) _
v1_GRMZM2G702112_P01 4a53 Zea mays 2E-20 530 22 39 0 (0) _
GRMZM2G702112_P01 3.21 Zea mays 2E-20 530 22 39 0 (0) _
GRMZM2G101932_P01 3.21 Zea mays 2E-19 494 21 38 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC24_OB3(1) DUF223(1) Rep_fac-A_C(1) REPA_OB_2(2) zinc_ribbon_15(1)
TargetP:	Cytoplasm (Class 2 C0.013; M0.093; S0.186; _0.930)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	566 aa (-cTP 521)
Molecular Weight	64.51 kDA(-cTP )
PI	6.07(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data