PPDB

The Plant Proteome Database

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AT1G52930.1   Ribosomal RNA processing Brix domain protein

Lab Annot.
Mapman: 29.2.2.50 protein.synthesis.misc ribososomal protein.BRIX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15460.1 11Arabidopsis thaliana031985910 (0)_
Os02g37870.1 7Oryza sativa4E-16333271836 (6)_
Os01g05530.1 7Oryza sativa4E-1620529500 (0)_
Zm00001eb245760_P003 agpv5Zea mays1E-16132269840 (0)_
v1_GRMZM2G168176_P01 4a53Zea mays1E-16132269845 (5)_
GRMZM2G168176_P01 3.21Zea mays1E-16132269841 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Brix(1)
TargetP: Cytoplasm (Class 2 C0.102; M0.082; S0.035; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 320 aa (-cTP 228)
Molecular Weight 36.70 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help