PPDB

The Plant Proteome Database

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AT1G52900.1   Toll-Interleukin-Resistance (TIR) domain family protein

Lab Annot.
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G61105.1 11Arabidopsis thaliana8E-5715755740 (0)M
AT5G48770.1 11Arabidopsis thaliana5E-1918433520 (0)_
AT1G72860.1 11Arabidopsis thaliana2E-1716828521 (0)_
Os07g37950.1 7Oryza sativa5E-5315949730 (0)M
Os07g37950.2 7Oryza sativa4E-4814450720 (0)M
v1_GRMZM2G319375_P01 4a53Zea mays1E-4517347680 (0)_
Zm00001eb107150_P001 agpv5Zea mays1E-4517347680 (0)_
GRMZM2G319375_P01 3.21Zea mays1E-4517347681 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TIR(2) TIR-like(1) TIR_2(1) Topoisom_I(2)
TargetP: Cytoplasm (Class 5 C0.259; M0.110; S0.089; _0.410)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 199 aa (-cTP 158)
Molecular Weight 22.81 kDA(-cTP )
PI 6.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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