PPDB

The Plant Proteome Database

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AT1G52770.1   Phototropic-responsive NPH3 family protein

Lab Annot.
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15570.1 11Arabidopsis thaliana046965740 (0)_
AT5G03250.2 11Arabidopsis thaliana3E-6540936560 (0)_
AT5G03250.1 11Arabidopsis thaliana5E-6440936560 (0)_
Os02g35970.1 7Oryza sativa5E-7145534520 (0)_
Os05g08530.1 7Oryza sativa3E-7038542590 (0)C
Os08g03650.1 7Oryza sativa7E-6138733540 (0)_
v1_GRMZM2G413113_P01 4a53Zea mays1E-8845840562 (2)C
GRMZM2G413113_P01 3.21Zea mays1E-8845840564 (4)C
Zm00001eb244600_P001 agpv5Zea mays4E-7550834500 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NPH3(1) Seadorna_VP6(1)
TargetP: Cytoplasm (Class 2 C0.191; M0.045; S0.128; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 454 aa (-cTP 446)
Molecular Weight 50.31 kDA(-cTP )
PI 8.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help